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8.8. Configuring the Bootloader

It is probably already functional, but it is always good to know how to configure and install the bootloader in case it disappears from the Master Boot Record. This can occur after installation of another operating system, such as Windows. The following information can also help you to modify the bootloader configuration if needed.

BACK TO BASICS Master boot record

The Master Boot Record (MBR) occupies the first 512 bytes of the first hard disk, and is the first thing loaded by the BIOS to hand over control to a program capable of booting the desired operating system. In general, a bootloader gets installed in the MBR, removing its previous content.

8.8.1. Identifying the Disks

CULTURE udev and /dev/

The /dev/ directory traditionally houses so-called “special” files, intended to represent system peripherals (see sidebar BACK TO BASICS Device access permissions). Once upon a time, it used to contain all special files that could potentially be used. This approach had a number of drawbacks among which the fact that it restricted the number of devices that one could use (due to the hardcoded list of names), and that it was impossible to know which special files were actually useful.
Nowadays, the management of special files is entirely dynamic and matches better the nature of hot-swappable computer devices. The kernel cooperates with udev to create and delete them as needed when the corresponding devices appear and disappear. For this reason, /dev/ doesn't need to be persistent and is thus a RAM-based filesystem that starts empty and contains only the relevant entries.
The kernel communicates lots of information about any newly added device and hands out a pair of major/minor numbers to identify it. With this udevd can create the special file under the name and with the permissions that it wants. It can also create aliases and perform additional actions (such as initialization or registration tasks). udevd's behavior is driven by a large set of (customizable) rules.
With dynamically assigned names, you can thus keep the same name for a given device, regardless of the connector used or the connection order, which is especially useful when you use various USB peripherals. The first partition on the first hard drive can then be called /dev/sda1 for backwards compatibility, or /dev/root-partition if you prefer, or even both at the same time since udevd can be configured to automatically create a symbolic link.
In ancient times, some kernel modules did automatically load when you tried to access the corresponding device file. This is no longer the case, and the peripheral's special file no longer exists prior to loading the module; this is no big deal, since most modules are loaded on boot thanks to automatic hardware detection. But for undetectable peripherals (such as very old disk drives or PS/2 mice), this doesn't work. Consider adding the modules, floppy, psmouse and mousedev to /etc/modules in order to force loading them on boot.
Configuration of the bootloader must identify the different hard drives and their partitions. Linux uses “block” special files stored in the /dev/ directory, for this purpose. Since Debian Squeeze, the naming scheme for hard drives has been unified by the Linux kernel, and all hard drives (IDE/PATA, SATA, SCSI, USB, IEEE 1394) are now represented by /dev/sd*.
Each partition is represented by its number on the disk on which it resides: for instance, /dev/sda1 is the first partition on the first disk, and /dev/sdb3 is the third partition on the second disk.
The PC architecture (or “i386”, including its younger cousin “amd64”) has long been limited to using the “MS-DOS” partition table format, which only allows four “primary” partitions per disk. To go beyond this limitation under this scheme, one of them has to be created as an “extended” partition, and it can then contain additional “secondary” partitions. These secondary partitions are numbered from 5. Thus the first secondary partition could be /dev/sda5, followed by /dev/sda6, etc.
Another restriction of the MS-DOS partition table format is that it only allows disks up to 2 TiB in size, which is becoming a real problem with recent disks.
A new partition table format called GPT loosens these constraints on the number of partitions (it allows up to 128 partitions when using standard settings) and on the size of the disks (up to 8 ZiB, which is more than 8 billion terabytes). If you intend to create many physical partitions on the same disk, you should therefore ensure that you are creating the partition table in the GPT format when partitioning your disk.
It is not always easy to remember what disk is connected to which SATA controller, or in third position in the SCSI chain, especially since the naming of hotplugged hard drives (which includes among others most SATA disks and external disks) can change from one boot to another. Fortunately, udev creates, in addition to /dev/sd*, symbolic links with a fixed name, which you could then use if you wished to identify a hard drive in a non-ambiguous manner. These symbolic links are stored in /dev/disk/by-id. On a machine with two physical disks, for example, one could find the following: 
mirexpress:/dev/disk/by-id# ls -l
total 0
lrwxrwxrwx 1 root root  9 23 jul. 08:58 ata-STM3500418AS_9VM3L3KP -> ../../sda
lrwxrwxrwx 1 root root 10 23 jul. 08:58 ata-STM3500418AS_9VM3L3KP-part1 -> ../../sda1
lrwxrwxrwx 1 root root 10 23 jul. 08:58 ata-STM3500418AS_9VM3L3KP-part2 -> ../../sda2
[...]
lrwxrwxrwx 1 root root  9 23 jul. 08:58 ata-WDC_WD5001AALS-00L3B2_WD-WCAT00241697 -> ../../sdb
lrwxrwxrwx 1 root root 10 23 jul. 08:58 ata-WDC_WD5001AALS-00L3B2_WD-WCAT00241697-part1 -> ../../sdb1
lrwxrwxrwx 1 root root 10 23 jul. 08:58 ata-WDC_WD5001AALS-00L3B2_WD-WCAT00241697-part2 -> ../../sdb2
[...]
lrwxrwxrwx 1 root root  9 23 jul. 08:58 scsi-SATA_STM3500418AS_9VM3L3KP -> ../../sda
lrwxrwxrwx 1 root root 10 23 jul. 08:58 scsi-SATA_STM3500418AS_9VM3L3KP-part1 -> ../../sda1
lrwxrwxrwx 1 root root 10 23 jul. 08:58 scsi-SATA_STM3500418AS_9VM3L3KP-part2 -> ../../sda2
[...]
lrwxrwxrwx 1 root root  9 23 jul. 08:58 scsi-SATA_WDC_WD5001AALS-_WD-WCAT00241697 -> ../../sdb
lrwxrwxrwx 1 root root 10 23 jul. 08:58 scsi-SATA_WDC_WD5001AALS-_WD-WCAT00241697-part1 -> ../../sdb1
lrwxrwxrwx 1 root root 10 23 jul. 08:58 scsi-SATA_WDC_WD5001AALS-_WD-WCAT00241697-part2 -> ../../sdb2
[...]
lrwxrwxrwx 1 root root  9 23 jul. 16:48 usb-LaCie_iamaKey_3ed00e26ccc11a-0:0 -> ../../sdc
lrwxrwxrwx 1 root root 10 23 jul. 16:48 usb-LaCie_iamaKey_3ed00e26ccc11a-0:0-part1 -> ../../sdc1
lrwxrwxrwx 1 root root 10 23 jul. 16:48 usb-LaCie_iamaKey_3ed00e26ccc11a-0:0-part2 -> ../../sdc2
[...]
lrwxrwxrwx 1 root root  9 23 jul. 08:58 wwn-0x5000c50015c4842f -> ../../sda
lrwxrwxrwx 1 root root 10 23 jul. 08:58 wwn-0x5000c50015c4842f-part1 -> ../../sda1
[...]
mirexpress:/dev/disk/by-id#
Note that some disks are listed several times (because they behave simultaneously as ATA disks and SCSI disks), but the relevant information is mainly in the model and serial numbers of the disks, from which you can find the peripheral file.
The example configuration files given in the following sections are based on the same setup: a single SATA disk, where the first partition is an old Windows installation and the second contains Debian GNU/Linux.

8.8.2. Configuring LILO

LILO (LInux LOader) is the oldest bootloader — solid but rustic. It writes the physical address of the kernel to boot on the MBR, which is why each update to LILO (or its configuration file) must be followed by the command lilo. Forgetting to do so will render a system unable to boot if the old kernel was removed or replaced as the new one will not be in the same location on the disk.
LILO's configuration file is /etc/lilo.conf; a simple file for standard configuration is illustrated in the example below.

Przykład 8.4. LILO configuration file

# The disk on which LILO should be installed.
# By indicating the disk and not a partition.
# you order LILO to be installed on the MBR.
boot=/dev/sda
# the partition that contains Debian
root=/dev/sda2
# the item to be loaded by default
default=Linux

# the most recent kernel image
image=/vmlinuz
  label=Linux
  initrd=/initrd.img
  read-only

# Old kernel (if the newly installed kernel doesn't boot)
image=/vmlinuz.old
  label=LinuxOLD
  initrd=/initrd.img.old
  read-only
  optional

# only for Linux/Windows dual boot
other=/dev/sda1
  label=Windows

8.8.3. GRUB 2 Configuration

GRUB (GRand Unified Bootloader) is more recent. It is not necessary to invoke it after each update of the kernel; GRUB knows how to read the filesystems and find the position of the kernel on the disk by itself. To install it on the MBR of the first disk, simply type grub-install /dev/sda.

NOTE Disk names for GRUB

GRUB can only identify hard drives based on information provided by the BIOS. (hd0) corresponds to the first disk thus detected, (hd1) the second, etc. In most cases, this order corresponds exactly to the usual order of disks under Linux, but problems can occur when you associate SCSI and IDE disks. GRUB stores correspondences that it detects in the file /boot/grub/device.map. If you find errors there (because you know that your BIOS detects drives in a different order), correct them manually and run grub-install again. grub-mkdevicemap can help creating a device.map file from which to start.
Partitions also have a specific name in GRUB. When you use “classical” partitions in MS-DOS format, the first partition on the first disk is labeled, (hd0,msdos1), the second (hd0,msdos2), etc.
GRUB 2 configuration is stored in /boot/grub/grub.cfg, but this file (in Debian) is generated from others. Be careful not to modify it by hand, since such local modifications will be lost the next time update-grub is run (which may occur upon update of various packages). The most common modifications of the /boot/grub/grub.cfg file (to add command line parameters to the kernel or change the duration that the menu is displayed, for example) are made through the variables in /etc/default/grub. To add entries to the menu, you can either create a /boot/grub/custom.cfg file or modify the /etc/grub.d/40_custom file. For more complex configurations, you can modify other files in /etc/grub.d, or add to them; these scripts should return configuration snippets, possibly by making use of external programs. These scripts are the ones that will update the list of kernels to boot: 10_linux takes into consideration the installed Linux kernels; 20_linux_xen takes into account Xen virtual systems, and 30_os-prober lists other operating systems (Windows, OS X, Hurd).

8.8.4. For Macintosh Computers (PowerPC): Configuring Yaboot

Yaboot is the bootloader used by old Macintosh computers using PowerPC processors. They do not boot like PCs, but rely on a “bootstrap” partition, from which the BIOS (or OpenFirmware) executes the loader, and on which the ybin program installs yaboot and its configuration file. You will only need to run this command again if the /etc/yaboot.conf is modified (it is duplicated on the bootstrap partition, and yaboot knows how to find the position of the kernels on the disks).
Before executing ybin, you must first have a valid /etc/yaboot.conf. The following is an example of a minimal configuration.

Przykład 8.5. Yaboot configuration file

# bootstrap partition
boot=/dev/sda2
# the disk
device=hd:
# the Linux partition
partition=3
root=/dev/sda3
# boot after 3 seconds of inactivity
# (timeout is in tenths of seconds)
timeout=30

install=/usr/lib/yaboot/yaboot
magicboot=/usr/lib/yaboot/ofboot
enablecdboot

# last kernel installed
image=/vmlinux
        label=linux
        initrd=/initrd.img
        read-only

# old kernel
image=/vmlinux.old
        label=old
        initrd=/initrd.img.old
        read-only

# only for Linux/Mac OSX dual-boot
macosx=/dev/sda5

# bsd=/dev/sdaX and macos=/dev/sdaX
# are also possible